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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912386.1_cds_XP_016462475.1_55701
CDS Infomation

[gene=LOC107785642] [db_xref=GeneID:107785642] [protein=endoglucanase 5-like] [protein_id=XP_016462475.1] [location=complement(join(62314..62603,62723..62797,62892..62936,63023..63350,63512..63675,63778..63901,64056..64220,64315..64401,64604..64804,65538..65750,66352..66555))] [gbkey=CDS]
Sequence

ATGGGAATATCATCAAAGTTACAAGTTATTGGTTTGTTGTTAGTTGGCCTACTGGCTTTG
CAGGCAGGGGCTAATTTTGATTATGGAGATGCCATGGACAAGACTTTGCTCTTCTTTGAG
GCACAGAGGTCTGGAAAATTGCCTCCACATCAACGTGTCAAATGGCGCGGCGATTCTGGA
CTCAAGGATGGTTTTCTCCAAGGGGTGAACTTGGTAGGAGGGTACTATGATGCAGGAGAT
CATGTAAAGTTTGGATTGCCAATGGCATTCAGTTTGACAATGCTAGCATGGAGTGCTGTT
GACTACAGCAAGGAAATTGTAAAACTTAATCAGATGGGCAATACCTTGGCTGCCATTAAG
TGGGGTACTGATTATTTCATCAAAGCACATACTCAGCCAAATGTTCTCTGGGCTCAGGTG
GGAGATGGAGAATCTGATCATTATTGTTGGGAGAGAGCAGAAGACATGACAACCCCAAGA
ACTGCTTATAAACTTGATCCCAACCACCCTGGTTCTGACCTTGCTGCTGAAACTGCTGCT
GCTTTGGCTGTTGCCGCTCTTGCATTCAAGCCTTATGACTCTTCCTACTCTGCCCTCCTT
TTAGTGCACGCGAAACAGCTATTCTCATTTGCGGATACCTTCAGAGGTTTGTATGATGAT
TCCATCCCAAATGCTCAAGCATTCTACACATCATCTGGTTATTCGGATGAGCTTCTTTGG
GCTGCTGCCTGGCTCTATCGAGCAACTAAGGATGTGTACTATTTAAAATATGTGGTGGAC
AATGCGGTATCTTTGGGTGGAACTGGATGGGCAGTCAGGGAATTTTCTTGGGACAATAAA
TATGCTGGTGTTCAAATCCTTCTTACCAAGATTCTCCTAGATGGAGATGGTGGATCATAC
ACTCCAACACTAAAACAGTACAAGGCTAAAGCAGATTACTTTACCTGTGCTTGTTTGCAG
AAAAATGATGGGTATAATGTAGTCCTGACTCCTGGAGGCCTGATTTATATTCGCGAATGG
AATAATCTGCAATACGCTTCATCAGCCGCTTTCCTACTTGCCGTGTACTCCGATTATCTT
TCTGAGAGAAAGGCTGTATTAACATGTCCGGAAGGTCAAGTTCGGCCATCAGATGTCCTT
TCCTTTGCTAAATCACAGGCTGATTACATTCTTGGTAAAAATCCCAAGGCTATTAGCTAC
TTGGTTGGTTATGGACAAAACTACCCAATCCATGTTCACCACAGAGGCGCCTCCATTGCC
CCTGTCTCAGTCCTTCATTCTGCTGTTAGTTGTATAGAAGGATTTGAGACTTGGTATCGC
CGCCCTCAGGCAAATCCCAACATTATATATGGTGGCCTTGTGGGAGGTCCAAGCAAAATC
GACGACTTCAGTGATGACAGGTCCAACTACGAACAAACCGAGCCAACATTATCCGGTTCA
GCTCCTCTTGTAGGACTCTTCTGCAAATTGCAGTCCCTCTCTGCAGGTTCTTATCATCAT
AGATTACCAACACCTTACCAGAAGCCTCCAGTTTTCTATCACCCACAAACAGCAGCTCCC
TACCATAAAGCTCCAGAATCATCAAACCCCTACAATAAAGCTCCAGGTGACCCGATCAAG
TTTTTGCACTCAATAATTTCAACATGGACAATAGGACCAACAACTTACTACAAGCACAAG
GTGGTGGTGAAGAACATATCTCAAAAGCCAATCACAAATCTCAAGTTAACGGTTGAAAAC
CTTTCAGGATCATTGTGGGGGCTCAGTCCATGCCTAGAGAAGAACACCTACGAGCTTCCT
CAGTGGATTAAAATACTATCACCTGGTTCAGAACTCATTTTTGTATATGTTCAAGGAGGT
GCCCAAGCCAGGGTTTCAACTAAGAGCTACCACTAA

Peptide Sequence

PEP ID

XP_016462475.1
PEP Infomation

PREDICTED: endoglucanase 5-like [Nicotiana tabacum]
Sequence

MGISSKLQVIGLLLVGLLALQAGANFDYGDAMDKTLLFFEAQRSGKLPPHQRVKWRGDSG
LKDGFLQGVNLVGGYYDAGDHVKFGLPMAFSLTMLAWSAVDYSKEIVKLNQMGNTLAAIK
WGTDYFIKAHTQPNVLWAQVGDGESDHYCWERAEDMTTPRTAYKLDPNHPGSDLAAETAA
ALAVAALAFKPYDSSYSALLLVHAKQLFSFADTFRGLYDDSIPNAQAFYTSSGYSDELLW
AAAWLYRATKDVYYLKYVVDNAVSLGGTGWAVREFSWDNKYAGVQILLTKILLDGDGGSY
TPTLKQYKAKADYFTCACLQKNDGYNVVLTPGGLIYIREWNNLQYASSAAFLLAVYSDYL
SERKAVLTCPEGQVRPSDVLSFAKSQADYILGKNPKAISYLVGYGQNYPIHVHHRGASIA
PVSVLHSAVSCIEGFETWYRRPQANPNIIYGGLVGGPSKIDDFSDDRSNYEQTEPTLSGS
APLVGLFCKLQSLSAGSYHHRLPTPYQKPPVFYHPQTAAPYHKAPESSNPYNKAPGDPIK
FLHSIISTWTIGPTTYYKHKVVVKNISQKPITNLKLTVENLSGSLWGLSPCLEKNTYELP
QWIKILSPGSELIFVYVQGGAQARVSTKSYH

Transcript Sequence

Gene sequence data has not been registered.